7th BigBrain Workshop: Challenges of big data integration

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Sessions*

LOC Session: The Local Landscape of Neuroscience in Iceland

Hands-on session 2B

Hands-on session 1A

Hands-on session 1B

Hands-on session 2A

Contributed Talks 3

Poster Session

Hands-on session 3A

Contributed Talks 2

Demo Session

Hands-on session 3B

Contributed Talks 1

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Contributions*

3D reconstruction of BigBrain2: Progress report on updated processing pipeline and application to existing annotations and cortical surfaces (in session "Contributed Talks 1")

3D reconstruction of BigBrain2: Progress report on updated processing pipeline and application to existing annotations and cortical surfaces (in session "Poster Session")

A 3D coordinate system and volumetric flatmap of the whole human neocortex with applications to data visualization and modeling (in session "Contributed Talks 2")

Advances in MSM surface registration to bridge data across the BigBrain and FS/HCP ecosystems (in session "Contributed Talks 1")

AI-driven brain modelling

Align with the NMIND Consortium for better brain imaging (in session "Contributed Talks 3")

An open access software ecosystem for multiscale neuroscience (in session "Hands-on session 2B")

Atelier3D-MCIN Tutorial – A software suite for interactive visualization, annotation and mapping of the big brain (in session "Hands-on session 3A")

BigBrain Analysis: Cellular-Level Precision at 1µm Resolution (in session "Poster Session")

BigBrain data processing with CBRAIN and DataLad (in session "Hands-on session 3B")

BigBrain Image Alignment with Unet and structural similarity (in session "Poster Session")

BigBrain Project Educational Lecture

Cerebral chemoarchitecture shares organizational traits with brain structure and function (in session "Poster Session")

Connectome to graph: building neural networks with brain-like connections (in session "Contributed Talks 2")

deCODE genetics contributions in imaging genetics (in session "LOC Session: The Local Landscape of Neuroscience in Iceland")

Exchanging data & knowledge (in session "Hands-on session 1B")

From structure to function in the human (in session "Poster Session")

HIBALL Lecture in Brain Analytics and Learning

High resolution cyto-, myelo- and receptor architectonic atlas of the macaque monkey brain (in session "Contributed Talks 1")

High-resolution 3D mapping of the amygdala - piriform region in the BigBrain (in session "Poster Session")

High-Resolution 3D Mapping of the Human Hypothalamus: Towards a Comprehensive Cytoarchitectonic Atlas (in session "Poster Session")

HippoMaps: structural and functional mapping of the hippocampus follows a 2D organization (in session "Contributed Talks 2")

Identifying Brain Imaging Biomarkers for Early Diagnosis of Rare Dementia through MRI Post-Processing (in session "LOC Session: The Local Landscape of Neuroscience in Iceland")

Integration of cytoarchitecture and brain-wide connectivity reveals topographic organization of macaque insula networks (in session "Contributed Talks 1")

Intracortical microstructural asymmetry in the human cortex: laminar differentiation, organization, heritability, and relevance to language function and psychopathological traits (in session "Contributed Talks 3")

Intracortical microstructural asymmetry in the human cortex: laminar differentiation, organization, heritability, and relevance to language function and psychopathological traits (in session "Poster Session")

Leveraging the BigBrain for Electrophysiology

MicroDraw multilayer: a web application to annotate multi-resolution multimodal data (in session "Demo Session")

Morphology-based correction of batch effects in histology and autoradiography (in session "Contributed Talks 1")

Multimodal gradients reveal cortical local-global organization (in session "Poster Session")

Neuromaps - a toolbox for structural and functional interpretation of brain maps (in session "Hands-on session 1A")

neuromaps: a Python toolbox for the structural and functional interpretation of brain maps (in session "Demo Session")

neuromaps: a Python toolbox for the structural and functional interpretation of brain maps (in session "Poster Session")

Neuronal activity modulates myelin plasticity and regeneration (in session "LOC Session: The Local Landscape of Neuroscience in Iceland")

On Uncertainty-aware Deep Learning for Cytoarchitecture Classification (in session "Poster Session")

Panel discussion: Challenges of big data integration

Panel discussion: Launching your Lab and Steering your Career

Personalized Human Brain Energy Atlas: Machine learning-based neuropil density from anatomical MRI (in session "Poster Session")

Personalized Human Brain Energy Atlas: Machine learning-based neuropil density from anatomical MRI (in session "Contributed Talks 2")

Relationship between receptor covariance and functional connectivity in macaque somatosensory areas (in session "Contributed Talks 1")

Reporting EEG Source Imaging clinical studies in the BigBrain space: an open challenge to compare results (in session "Contributed Talks 2")

Scaling for Big Data: An Enhanced Surface Reconstruction of the Hippocampus Leveraging Delaunay Triangulation for High-Resolution Mapping from Unfolded to Native Spaces (in session "Contributed Talks 1")

Sievers Lecture in Computational Neuroscience

siibra-explorer and siibra-python - How to use EBRAINS atlas services with the online Siibra Explorer and Siibra Python tools (in session "Hands-on session 2A")

SynthEco: A digital system for analyzing the brain-to-society mechanisms of lifecourse human behavior in its multi-layered and dynamic environment and its mental health and well-being consequences (in session "Contributed Talks 3")

System-level cortical maturation links to adolescent resilience to adverse life events (in session "Poster Session")

The brainstem perspective on cortical functional connectivity (in session "Contributed Talks 3")

The status quo of automated cytoarchitecture analysis: Where are we, and where are we going? (in session "Contributed Talks 2")

The Virtual Big Brain in clinical applications

Towards an EBRAINS service for brain wave analysis: Cobrawap (in session "Poster Session")

Towards an EBRAINS service for brain wave analysis: Cobrawap (in session "Demo Session")

Welcome and Introduction

Welcome notes

Whole-brain dynamical modeling of the adolescent developing brain (in session "Contributed Talks 3")

Whole-brain dynamical modeling of the adolescent developing brain (in session "Poster Session")

Wrap up and closing

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Events scheduled on*

04/10/2023

05/10/2023

06/10/2023

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