8th BigBrain Workshop - Challenges of Multimodal Data Integration

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Sessions*

Sievers Lecture

Panel Discussion (Moderator: Katrin Amunts)

Contributed Talks - Multimodal data acquisition and processing (co-Chairs: Jordan DeKraker, Timo Dickscheid)

Contributed Talks - Segmentation and AI (co-Chairs: Claire Walsh, Jussi Tohka)

Poster Session

HIBALL Lecture

LOC Session (Chair: Maurizio Corbetta)

Contributed Talks - Modelling and Connectivity (co-Chairs: Lorenzo Pini, Boris Bernhardt)

Contributed Talks - Mapping and Atlases (co-Chairs: Elizabeth Rounis, Thomas Funck)

BigBrain Project Educational Lecture

Hands-on Session 1

Hands-on Session 2

Hands-on Session 3

Special Session NeuroAI

Panel Discussion

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Contributions*

3D reconstruction of BigBrain2: Progress report on semi-automated repairs of histological sections (in session "Poster Session")

Adaptation of FreeSurfer v7.4 pipeline for automated volumetric parcellation and cortical surface extraction of BigBrains 1 and 2 (in session "Contributed Talks - Multimodal data acquisition and processing (co-Chairs: Jordan DeKraker, Timo Dickscheid)")

Analyzing Regional Organization of the Human Hippocampus in 3D-PLI Using Contrastive Learning and Geometric Unfolding (in session "Contributed Talks - Segmentation and AI (co-Chairs: Claire Walsh, Jussi Tohka)")

Approaches to brain control (in session "Special Session NeuroAI")

Architecture and function of spontaneous brain activity in health and pathology (in session "HIBALL Lecture")

Asymmetry of hippocampal subfield volumes in a heterogenous cohort of focal drug-resistant epilepsies (in session "Contributed Talks - Mapping and Atlases (co-Chairs: Elizabeth Rounis, Thomas Funck)")

Autoencoders for cluster analysis of rat brain histology (in session "Contributed Talks - Segmentation and AI (co-Chairs: Claire Walsh, Jussi Tohka)")

BigBrain as part of the Multimodal Atlas at EBRAINS (in session "Panel Discussion (Moderator: Katrin Amunts)")

BigBrain data processing with CBRAIN (in session "Hands-on Session 2")

BigBrain Image blind restoration and alignment with generative priors, U-Net and structural similarity (in session "Contributed Talks - Segmentation and AI (co-Chairs: Claire Walsh, Jussi Tohka)")

BigBrain Workshop Trainee Day - Welcome notes

Brain connectivity and glioma: a new approach (in session "LOC Session (Chair: Maurizio Corbetta)")

Brain glial cell analysis using artificial intelligence: defining the role of Sharpin in AD. (in session "Poster Session")

Brain Signature for Emotional Burnout (in session "Poster Session")

Changes in connectivity between ‘higher order’ perceptual areas in apraxia after stroke (in session "Poster Session")

Comprehensive Insights into Neural Activity and Metabolic Processes: Disentagling the Glycolytic Pathway to Examine the Resting-State [18F]FDG-PET/fMRI Coupling (in session "Poster Session")

Cortical Gyrification Patterns Associated with Neuroticism in Panic Disorder and Healthy Individuals (in session "Poster Session")

Cortical hierarchy relates to microstructural organization (in session "Poster Session")

cuBNM: GPU-Accelerated Biophysical Network Modeling (in session "Contributed Talks - Modelling and Connectivity (co-Chairs: Lorenzo Pini, Boris Bernhardt)")

Cytoarchitectonic mapping of five new areas in the anterior lateral prefrontal cortex (in session "Poster Session")

CytoNet: A Deep Neural Network for Whole-brain Characterization of Human Cytoarchitecture (in session "Contributed Talks - Segmentation and AI (co-Chairs: Claire Walsh, Jussi Tohka)")

Dimensional perspectives on multiscale cortical organization

Disconnectomic simulation reveals repetition pathways in a case of mixed transcortical aphasia (in session "Poster Session")

EEG Simulation through Integration of Structural Connectivity Data and High-Density Surface Meshes in Brain Region-Specific Network Models (in session "Contributed Talks - Modelling and Connectivity (co-Chairs: Lorenzo Pini, Boris Bernhardt)")

Exploring the links between the localization of cortical areas and the variability of folding patterns (in session "Contributed Talks - Mapping and Atlases (co-Chairs: Elizabeth Rounis, Thomas Funck)")

Fast large-scale spiking neuronal network simulations with NEST GPU: memory and communications optimization (in session "Poster Session")

Glioma-Induced Alterations in Structural-Functional Connectivity Integration (in session "Poster Session")

High-resolution 3D Mapping of the Human Hypothalamus:Towards a Comprehensive Cytoarchitectonic Atlas (in session "Contributed Talks - Mapping and Atlases (co-Chairs: Elizabeth Rounis, Thomas Funck)")

HippoMaps: multiscale cartography of human hippocampal organization (in session "Contributed Talks - Mapping and Atlases (co-Chairs: Elizabeth Rounis, Thomas Funck)")

Improving Brain Simulation Accuracy: Sensitivity Analysis and Realistic Time Delays in Neural Mass Models (in session "Contributed Talks - Modelling and Connectivity (co-Chairs: Lorenzo Pini, Boris Bernhardt)")

Indirect network disconnection methods (in session "Hands-on Session 1")

Introduction to the Allen Institute Single Cell Ecosystem (in session "Hands-on Session 1")

Label-free biomolecular tissue analysis in the living brain via vibrational fiber photometry at arbitrary depth (in session "Contributed Talks - Multimodal data acquisition and processing (co-Chairs: Jordan DeKraker, Timo Dickscheid)")

Machine learning analysis of astrocytes in Sharpin mutation mouse model. (in session "Poster Session")

Making the multiscale organization of the human brain accessible to reproducible workflows using siibra-python (in session "Hands-on Session 3")

Mapping neurotransmitter receptor distributions in the macaque cortex (in session "Contributed Talks - Multimodal data acquisition and processing (co-Chairs: Jordan DeKraker, Timo Dickscheid)")

Mapping superficial white matter architecture on BigBrain (in session "Contributed Talks - Mapping and Atlases (co-Chairs: Elizabeth Rounis, Thomas Funck)")

Mapping superficial white matter architecture on BigBrain (in session "Poster Session")

Minimizing time-to-result: Cobrawap latest developments and applications (in session "Contributed Talks - Modelling and Connectivity (co-Chairs: Lorenzo Pini, Boris Bernhardt)")

Modelling re-entry excitation and interventions in a personalized neural field model of the cortex (in session "Poster Session")

Moderated discussion (in session "Panel Discussion (Moderator: Katrin Amunts)")

Modulation of Brain Resilience with Transcranial Magnetic Stimulation: a TMS-EEG Study (in session "Poster Session")

Neuropil distributions in the human brain predict resting-state functional networks (in session "Contributed Talks - Modelling and Connectivity (co-Chairs: Lorenzo Pini, Boris Bernhardt)")

Novel insights into brain metabolism and functional coupling in healthy connectomes and their mismatch in pathology (in session "Poster Session")

PET connectomics: Exploring brain network complexity from a molecular imaging perspective (in session "LOC Session (Chair: Maurizio Corbetta)")

Step by Step: Towards a gapless 1 micron BigBrain with Diffusion Models (in session "Contributed Talks - Segmentation and AI (co-Chairs: Claire Walsh, Jussi Tohka)")

Sulcal morphometry for multiple subjects using BrainVisa / Morphologist (in session "Hands-on Session 2")

Surface-based parcellation and vertex-wise analysis of ultra high-resolution ex vivo 7 tesla MRI in Alzheimer’s disease and related dementias (in session "Contributed Talks - Mapping and Atlases (co-Chairs: Elizabeth Rounis, Thomas Funck)")

Switching patterns of cortical-subcortical interaction in the human brain (in session "Poster Session")

The BigMac Dataset: combining multi-contrast MRI and microscopy in the macaque brain (in session "Hands-on Session 3")

The BRAIN Initiative Cell Atlas Network: Comprehensive multimodal atlases of the human brain (in session "BigBrain Project Educational Lecture")

The Clinical Connectome: From Neurodegenerative to Focal Brain Diseases (in session "LOC Session (Chair: Maurizio Corbetta)")

The emergent properties of the connected brain (in session "Sievers Lecture")

The Extremely Brilliant Brain: The Isotropic Micrometric Human Brain Dataset (in session "Contributed Talks - Multimodal data acquisition and processing (co-Chairs: Jordan DeKraker, Timo Dickscheid)")

The McGill multimodal data ecosystem (in session "Panel Discussion (Moderator: Katrin Amunts)")

The Semi-automated Quantification Approach of The Activated Microglia in a Mouse Model of Alzheimer's Disease (in session "Poster Session")

Towards Universal Instance Segmentation Models in Biomedical Imaging (in session "Contributed Talks - Segmentation and AI (co-Chairs: Claire Walsh, Jussi Tohka)")

Welcome and Introduction

Wrap Up and Closing

The interaction between early sexual trauma and diagnosis of panic disorder on brain structural connectivity: A human connectome study (in session "Poster Session")

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09/09/2024

10/09/2024

11/09/2024

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