LEAPS-INNOV Workflow Co-Working Sprint Finish

Thursday Mar 30, 2023, 9:00 AM → 12:10 PM Europe/Berlin

O1.109, Building 99 (DESY Hamburg)

What is this about?

In LEAPS-Innov WP7, we are working on novel compression schemes for data recorded at synchrotron light sources. In the process, we discovered a lot of genuine ways to reconstruct and record data. Unfortunately, many of these workflows were never shared or archived in a way that has reproducibility in mind.

 

With this co-working sprint, we would like to change that!  The goal of this co-working sprint is to pair scientists/engineers with people experienced in using a workflow engine that fosters reproducibility. This event marks the finish line of the sprint. (see the kick-off event for more details)

 

Our Teams

• FAXTOR @ ALBA, contact: Alessandra Patera
• P11 @ DESY, contact: Helena Taberman
• Dunno @ KIT, contact: Yaroslav Zharov
• M&M @ HZDR/DESY, contact: Michal Smid

Our Mentors

We are happy to have the following workflow mentors at our disposal:

• Chris Hakkaart / Seqera Labs, experience with nextflow
• Maxime Garcia / Seqera Labs, experience with nextflow
• Felicita Gernhardt / HZDR, experience with snakemake
• David Pape / HZDR, experience with snakemake
• Peter Steinbach / HZDR, experience with snakemake

 

Note: Please use the registration below to indicate your attendance!

9:00 AM → 10:00 AM Retrospection of the Sprint (Closed Session to Sprint Participants)

Speaker: Peter Steinbach (HZDR)

10:00 AM → 10:30 AM Coffee

10:30 AM → 10:52 AM Final Presentation Team FAXTOR

Presentation of sprint results (15min) + 7min Q&A

Speakers: Alessandra Patera , Frederico Cova

10:52 AM → 11:14 AM Final Presentation Team P11

Presentation of sprint results (15min) + 7min Q&A

Speaker: Helena Tabermann

11:14 AM → 11:36 AM Final Presentation Team M&M

Presentation of sprint results (15min) + 7min Q&A

Speaker: Michal Smid

11:40 AM → 11:50 AM Wrap-Up and Farewell

Speaker: Peter Steinbach (HZDR)