Brief content:
1. Simplifying reproducibility for users and authors of scientific tools
2. Introduction to Helmholtz Imaging Solutions and Album
3. Basics of using Helmholtz Imaging Solutions
4. Writing your own Helmholtz Imaging Solution
5. Publishing solutions in a catalog
→ Register here ←
Brief Content:
1. Introduction to Machine Learning-based Image Analysis
2. Applications and Examples on Biomedical Images
3. Introduction to nnU-Net
4. Hands-on Tutorial on how to train and apply nnU-Net (using google colab). The tutorial starts right after this course and will take 45min, number of participants is limited to 30.
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Brief Content:
This tutorial is designed as a follow-up to the intermediate course "Machine Learning-Based Biomedical Image Analysis" on September 15, 2022 at 10:00 by Paul Jäger et al.
It comprises a hands-on Tutorial on how to train and apply nnU-Net (using google colab). The number of participants is limited to 30.
*Participation in the course "Machine Learning-Based...
based on python, follow-up to the course by Paul Jäger on September 15, 2022.
The course will build on the introduction to convolutional neural networks in Imaging by Paul Jäger, and will cover essential rules for designing your own networks, in particular when dealing with large image data. You will get hands-on experience in setting up and training your own networks for image analysis...
This 30min slot is optional for those who had problems installing the program.
https://www.napari-hub.org/plugins/devbio-napari#installation
Please do install the programm before!
In case of issues with the installation, attendees can reach out any time – before the course - by opening a thread on https://image.sc...
It is recommended to take a Python-Basics Course before. For example from the first week of this Summer Academy.
In this course we will introduce image processing with Python, Jupyter lab and Napari. Students will learn how to process images interactively in Napari and afterwards how to replicate the same results in Jupyter notebooks. Additionally, the students will get an idea how to...
