Name: NFDI4Microbiota and DZIF: Linux basics and scripting for bioinformatics
Start: 2024-11-25T09:00:00+01:00
End: 2024-11-27T16:05:00+01:00
Location: BRICS, Rebenring 56, Braunschweig

NFDI4Microbiota and DZIF: Linux basics and scripting for bioinformatics

from Monday 25 November 2024 (09:00) to Wednesday 27 November 2024 (16:05)

Monday 25 November 2024

09:00 * Course introduction * Introduction to Linux * Connecting to the class environment * Using the shell, navigating the filesystem, working with files, using commands * Permissions
* Course introduction * Introduction to Linux * Connecting to the class environment * Using the shell, navigating the filesystem, working with files, using commands * Permissions
09:00 - 18:05
Room: 044 Computer room/EDV-Übungsraum
Tuesday 26 November 2024

09:00 Linux basics and scripting for bioinformatics: Second day
Linux basics and scripting for bioinformatics: Second day
09:00 - 12:00
Room: 44 * Scripting constructs / pipelines * Installing software * Working on bioinformatics exercise

12:00 Bioinformatics Workshop “Linux basics and scripting for bioinformatics
Bioinformatics Workshop “Linux basics and scripting for bioinformatics
12:00 - 18:05
Room: 46 seminar room * Scripting constructs / pipelines * Installing software * Working on bioinformatics exercise
Wednesday 27 November 2024

09:00 Bioinformatics Workshop “Linux basics and scripting for bioinformatics: third day
Bioinformatics Workshop “Linux basics and scripting for bioinformatics: third day
09:00 - 16:05
* Usage of the Slurm job scheduler * Details of HZI environment - As time allows * Associated themes (scripting options, Git) * Discussion of individual problems

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