Image Processing using Python

Session

Lecture and Exercises

16 Jan 2024, 15:15

Zoom

3. Working with scikit-image

16/01/2024, 15:15

An introduction to scikit-image, a collection of algorithms for image processing.

5. Now you!

16/01/2024, 15:45

Work on and discuss the three tasks on "Working with scikit-image" in breakout rooms.

6. Drawing and Bitwise Operations

16/01/2024, 16:30

Basic toolkit of scikit-image operators to perform simple analyses of images based on changes in colour or shape.

10. Blurring Images

17/01/2024, 15:15

Blurring as a filter to modify images.

9. Creating histograms

17/01/2024, 15:45

Understanding the distribution of colour values in an image.

11. Now you!

17/01/2024, 16:00

Work on and discuss the four tasks on "Creating Histograms" and "Blurring Images" in breakout rooms.

12. Looking back

18/01/2024, 13:00

Recapitulating yesterday's course content and discussing questions that may have appeared meanwhile.

13. Thresholding

18/01/2024, 13:15

Thresholding is a type of image segmentation, where we change the pixels of an image to make the image easier to analyze. You will learn how to use scikit-image functions to apply thresholding to an image.

14. Now you!

18/01/2024, 13:45

Work on and discuss the five tasks on "Thresholding" in breakout rooms (to be continued after the break).

15. Now you!

18/01/2024, 15:15

Work on and discuss the five tasks on "Thresholding" in breakout rooms (continued).

16. Connected Component Analysis

18/01/2024, 15:45

17. Now you!

18/01/2024, 16:30

Work on and discuss the seven tasks on "Connected Component Analysis" in breakout rooms (to be continued tomorrow).

18. Looking back

19/01/2024, 13:00

Recapitulating yesterday's course content and discussing questions that may have appeared meanwhile.

19. Now you!

19/01/2024, 13:15

Work on and discuss the seven tasks on "Connected Component Analysis" in breakout rooms (continued).

20. Community-developed checklists for publishing images and image analyses

19/01/2024, 14:00

Do's and Don'ts in image processing: https://doi.org/10.1038/s41592-023-01987-9.

21. Capstone Challenge

19/01/2024, 15:15

Hands-on "Morphometrics".

22. Conclusions

19/01/2024, 16:15

Concluding remarks and open discussion.